EpiSearch: Mapping of Conformational Epitopes

References:

Negi, S.S. and Braun, W., Automated Detection of Conformational Epitopes using Phage Display Peptide Sequences. Bioinform. Biol. Insights, 3, 71–81, 2009. Download PDF file

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🧬 Epitope Prediction Form

Peptides:	Example: Please type or paste your phage display peptides in the following order: CQMWAPQWGPDC CKLYWADGELTC CKLYWADGEFTC CVDYHYEGTITC CVDYHYEGAITC
Project Name:
Email:
Patch Size (Å):
Area Cutoff:
Accuracy Cutoff:
Upload PDB File:

Notes:
• Use monomer only. Do not upload a protein complex.
• Use a single word for project name and PDB filename (e.g., ABCD123456XYZ.pdb).
• How to use EpiSearch

Example output from EpiSearch WebServer:

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This website is developed, designed (based on SCSB template), and maintained by Surendra S. Negi, The University of Texas Medical Branch, 301 University Blvd, Galveston, TX, 77555. Last updated on 13th Jan, 2023.