EpiSearch: Mapping of Conformational Epitopes

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Please type or paste your peptide sequences. Please use following order LLTTNKD LTDSNKD ELPTNKD ... Please enter your project name: Please enter your Email Address: For information purpose only Please enter Patch Size(A): 10 for 7mer, 12 for 12mer's Please enter areacutoff(A^2): Default is 10.0 Please enter accuracy cutoff: Allowed mismatch, 1 to n-2. Default is 3. Please select your PDB File:

Help: 1) Please use only one chain in input PDB file. Do not upload a protein complex.
          2) Please use only word name for PDB file like ABCD123456XYZ.pdb
              Following is the example output from EpiSearch

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Reference: Negi, S.S. and Braun, W. Automated Detection of Conformational Epitopes using Phage Display Peptide Sequences. Bioinform. Biol. Insights, 3, 71-81, 2009. Download PDF file

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Number of Visitors Since August 15, 2008

Welcome to EpiSearch

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Example output from EpiSearch WebServer.